Restriction Digests—Nature of Overhangs The unpaired single-stranded nucleotides left at DNA termini after certain restriction enzyme cuts are referred to as:

Difficulty: Easy

Correct Answer: Sticky ends

Explanation:


Introduction / Context:
Restriction enzymes can generate either blunt ends or single-stranded overhangs. Overhangs provide complementarity that facilitates specific annealing and efficient ligation in recombinant DNA techniques.


Given Data / Assumptions:

  • Some enzymes (EcoRI) produce 5' overhangs; others (KpnI) produce 3' overhangs.
  • Overhangs enable base-pairing with compatible ends.
  • Terminology distinguishes overhangs (“sticky ends”) from fully double-stranded “blunt ends.”


Concept / Approach:
“Sticky ends” describes cohesive termini with unpaired nucleotides that can hydrogen-bond to complementary sequences. This property is exploited to directional-clone inserts into vectors cut with compatible enzymes.


Step-by-Step Solution:

Identify that the question refers to unpaired nucleotides at ends.Recall the standard term: sticky (cohesive) ends.Exclude unrelated terms (ligase is an enzyme; restriction fragments are the cut pieces regardless of end type).


Verification / Alternative check:
Cloning manuals define sticky ends as overhangs that anneal via base pairing prior to ligase sealing of the backbone.


Why Other Options Are Wrong:

  • Single strands: too generic; does not denote cohesive ends specifically.
  • Restriction fragments: includes blunt- and sticky-ended pieces.
  • Ligases: enzymes that seal nicks; not DNA ends.
  • Polylinkers: engineered multiple-cloning sites in vectors.


Common Pitfalls:
Confusing overhang type (5' vs 3') with the general property “sticky.”


Final Answer:
Sticky ends

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