Difficulty: Medium
Correct Answer: Bind oligo-dT, treat with reverse transcriptase, digest with RNase, add G residues to the 3' end, bind oligo-dC, treat with DNA polymerase
Explanation:
Introduction / Context:
Complementary DNA (cDNA) synthesis converts processed eukaryotic mRNA into DNA for cloning and expression. A classical method uses an oligo-dT primer to anneal to the mRNA poly(A) tail, followed by first-strand synthesis, RNA removal or nicking, and tailing to prime second-strand synthesis. Correct step order ensures successful, full-length cDNA generation.
Given Data / Assumptions:
Concept / Approach:
Map the workflow: prime first strand with oligo-dT → synthesize cDNA with reverse transcriptase → remove RNA template → tail the cDNA with dG → anneal oligo-dC → extend second strand with DNA polymerase. This produces double-stranded cDNA ready for cloning adapters or linkers.
Step-by-Step Solution:
Verification / Alternative check:
Classical cDNA library protocols and kit manuals mirror this sequence, with variations (e.g., second-strand synthesis by RNase H/DNA Pol I method) but the listed tailing order remains valid for homopolymer tailing approaches.
Why Other Options Are Wrong:
Common Pitfalls:
Confusing random-primed cDNA approaches with oligo-dT tailing workflows; mixing up dA/dG tailing directions.
Final Answer:
Bind oligo-dT, treat with reverse transcriptase, digest with RNase, add G residues to the 3' end, bind oligo-dC, treat with DNA polymerase
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