Aromatic residues and protein spectroscopy: strongest UV absorption at 280 nm Which pair of amino acids together accounts for the strongest absorbance signal near 280 nm used to estimate protein concentration?

Biochemistry Structure and Properties of Amino Acids Difficulty: Easy
Choose an option
  • A
    Threonine & Histidine
  • B
    Trp & Tyrosine
  • C
    Cysteine & Asparagine
  • D
    Phenylalanine & Proline
  • E
    Glycine & Serine

Answer

Correct Answer: Trp & Tyrosine

Explanation

Introduction / Context:UV absorbance at 280 nm is a standard method for estimating protein concentration. The signal arises primarily from aromatic side chains with strong electronic transitions in this region.

Given Data / Assumptions:

  • We consider typical amino acid chromophores.
  • Assume neutral pH and standard pathlengths for spectrophotometry.

Concept / Approach:Tryptophan (Trp) contributes the largest molar absorptivity at 280 nm, followed by tyrosine (Tyr). Phenylalanine absorbs mainly closer to 257 nm and much more weakly at 280 nm. Disulfide-linked cystines also absorb but contribute less than Trp or Tyr.

Step-by-Step Solution:Identify primary chromophores: Trp > Tyr > Phe.Select the pair that maximizes 280 nm signal: Trp and Tyr.Exclude pairs lacking strong aromatic transitions at 280 nm.

Verification / Alternative check:Common protein assays (A280) and extinction coefficient calculations weight Trp and Tyr residues most heavily.

Why Other Options Are Wrong:Threonine, histidine, cysteine, asparagine, proline, glycine, serine lack strong 280 nm absorbance; phenylalanine’s contribution is modest.

Common Pitfalls:Overestimating phenylalanine’s role at 280 nm; forgetting that buffer components can also absorb UV.

Final Answer:Trp & Tyrosine.

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