Why are serine and threonine classified as polar amino acids? Identify the functional group in their side chains that confers polarity and enables common modifications.

Difficulty: Easy

Correct Answer: A reactive hydroxyl (–OH) group in the side chain

Explanation:


Introduction / Context:
Serine (Ser) and threonine (Thr) are central to enzyme catalysis, hydrogen bonding, and post-translational modification. Their classification as polar stems from a shared functional group that engages in aqueous interactions and chemistry.



Given Data / Assumptions:

  • Ser and Thr both contain side-chain alcohols.
  • Polarity is assessed by capacity for hydrogen bonding and interaction with water.
  • Common PTMs include O-linked glycosylation and phosphorylation.



Concept / Approach:
The hydroxyl (–OH) group is polar, donates/accepts hydrogen bonds, and serves as a nucleophilic site for kinase-mediated phosphorylation (Ser/Thr kinases) and glycosyltransferase reactions (O-glycans).



Step-by-Step Solution:
Identify functional group: side-chain alcohol for Ser and Thr.Link to polarity: –OH increases hydrophilicity via hydrogen bonding with solvent and residues.Connect to biology: –OH enables phosphorylation, a core regulatory switch in signaling pathways.Choose the option specifying the hydroxyl group.



Verification / Alternative check:
Proteomic datasets show abundant Ser/Thr phosphorylation; structural models depict –OH groups forming intra-protein hydrogen bonds that guide folding and active-site geometry.



Why Other Options Are Wrong:

  • Sulfhydryl: characteristic of cysteine, not Ser or Thr.
  • Keto/aldehyde: not present in standard amino acid side chains here.



Common Pitfalls:
Confusing threonine with tyrosine (which is aromatic phenolic OH) or with cysteine (thiol); assuming all polar residues are charged (Ser/Thr are polar uncharged).



Final Answer:
A reactive hydroxyl (–OH) group in the side chain

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