Standard vs. nonstandard amino acids — Identify the nonstandard (post-translationally derived) amino acid among the following choices.

Difficulty: Easy

Correct Answer: Hydroxyproline

Explanation:


Introduction / Context:
Nonstandard amino acids arise through post-translational modification or occur as metabolic intermediates but are not directly encoded by the universal genetic code. Recognizing them is vital for interpreting protein composition and stability.



Given Data / Assumptions:

  • Cysteine, isoleucine, and histidine are among the 20 standard amino acids.
  • Hydroxyproline is a hydroxylated derivative of proline found prominently in collagen.
  • Question targets the “nonstandard” residue present in proteins owing to modification.


Concept / Approach:
Hydroxylation of proline to hydroxyproline is catalyzed by prolyl hydroxylase and requires vitamin C as a cofactor. This modification is essential for collagen triple-helix stability through enhanced hydrogen bonding. The others are encoded directly by codons and incorporated during translation.



Step-by-Step Solution:

List standard residues: cysteine, isoleucine, histidine.Identify hydroxyproline as post-translationally modified proline.Select hydroxyproline as the nonstandard amino acid.


Verification / Alternative check:
Protein hydrolysate analyses from collagen reveal abundant hydroxyproline; genetic code tables do not list it as a primary residue.



Why Other Options Are Wrong:

  • Cysteine, isoleucine, histidine: all are standard proteinogenic amino acids.


Common Pitfalls:
Confusing “nonstandard” with “non-protein”; hydroxyproline is nonstandard yet a genuine component of proteins after modification.



Final Answer:
Hydroxyproline

More Questions from Structure and Properties of Amino Acids

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