Trends during a successful protein purification scheme: Which changes do you typically expect as purification proceeds?
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ASpecific activity increases
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BSpecific activity decreases
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CNumber of distinct proteins in the sample decreases
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DBoth (a) and (c)
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ETotal yield always increases at every step
Answer
Correct Answer: Both (a) and (c)
Explanation
Introduction / Context:Protein purification aims to enrich the target relative to contaminants. Tracking total activity, total protein, specific activity, and yield at each step reveals progress and efficiency.
Given Data / Assumptions:
- Specific activity = units per mg protein.
- Each step removes contaminants but may lose some target.
- Analytical checks include SDS-PAGE and activity assays.
Concept / Approach:As impurities are removed, the denominator (total protein) drops faster than the numerator (activity) for a good protocol, so specific activity rises. Also, chromatography and fractionation reduce the number of proteins present. Total yield often declines somewhat due to inevitable losses.
Step-by-Step Solution:Start with crude lysate: low specific activity, many proteins.Apply fractionation/columns: contaminants removed, target concentrated.Observe: specific activity up; band complexity on SDS-PAGE down.
Verification / Alternative check:Purification tables show rising specific activity and decreasing total protein across steps, with yield tracked to ensure acceptable losses.
Why Other Options Are Wrong:
- Specific activity decreases: Indicates poor or damaging procedures.
- Total yield always increases: Unrealistic; losses occur during handling.
Common Pitfalls:Equating high yield with purity; over-optimizing for yield can sacrifice purity and vice versa.
Final Answer:Both (a) and (c).