Vector strategy — In co-integrating transformation systems used with Agrobacterium, where must a region of DNA homology be present to allow recombination?

Difficulty: Medium

Correct Answer: between vector plasmid and Ti-plasmid

Explanation:


Introduction / Context:
Co-integrating vector systems predated today’s binary vectors. They rely on homologous recombination between an E. coli-derived vector and the resident Ti plasmid in Agrobacterium, forming a larger co-integrate that carries the engineered T-DNA for plant transformation.


Given Data / Assumptions:

  • Homology is required for stable recombination events.
  • The Ti plasmid provides virulence functions needed for T-DNA processing and transfer.
  • The engineered segment must be captured into a transferable context.


Concept / Approach:
To form a co-integrate, the small cloning vector and the Ti plasmid share a homologous region. Recombination integrates the engineered T-DNA into the Ti backbone inside Agrobacterium, enabling subsequent mobilization of T-DNA into plant cells.


Step-by-Step Solution:

Identify the two replicons to be recombined: the E. coli vector and the Ti plasmid.Provide a shared sequence to direct homologous recombination.After recombination, the co-integrate harbors T-DNA plus vir functions.Thus, homology must exist between the vector plasmid and the Ti plasmid.


Verification / Alternative check:
Historic co-integrative systems (e.g., pRK290 derivatives) used defined homology regions to capture engineered inserts into Ti backbones.


Why Other Options Are Wrong:

  • Homology restricted to only one plasmid cannot mediate inter-molecular recombination.
  • “None of these” ignores the fundamental requirement of shared sequence.
  • Plant genome homology is irrelevant for plasmid–plasmid recombination in Agrobacterium.


Common Pitfalls:
Confusing co-integrative vectors with binary vectors; binary systems do not require recombination with the Ti plasmid because vir genes act in trans.


Final Answer:
between vector plasmid and Ti-plasmid

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