Agrobacterium tumefaciens (Ti plasmid) — Virulent strains carry large tumor-inducing (Ti) plasmids that mediate DNA transfer to plant cells. How many distinct border sequence sets required for gene transfer are present on a classical Ti plasmid (i.e., the left and right T-DNA borders)?

Difficulty: Easy

Correct Answer: Two sets of sequences necessary for gene transfer

Explanation:


Introduction / Context:
Agrobacterium tumefaciens transfers a defined DNA segment, called transfer DNA (T-DNA), from its Ti plasmid into the nuclear genome of wounded plant cells. This process depends on short, specific border sequences that mark the left and right ends of the T-DNA to be mobilized. Understanding the number and role of these borders is foundational in plant genetic engineering and binary vector design.


Given Data / Assumptions:

  • A Ti plasmid harbors a T-DNA region destined for transfer.
  • Transfer requires precise recognition sites (border repeats) by the Vir protein machinery.
  • Only DNA between the borders is transferred and integrated.


Concept / Approach:
The essential cis-acting signals for T-DNA excision and transfer are two short, largely imperfect direct repeats known as the left border (LB) and right border (RB). VirD1/VirD2 endonuclease complex nicks these borders to generate the transferable single-stranded T-strand. Therefore, there are two sets of required border sequences per T-DNA: one at each end.


Step-by-Step Solution:

Identify the cis signals → left and right border repeats.Relate to mechanism → VirD1/VirD2 nick at borders to form T-strand.Infer count → two border sequence sets per T-DNA.


Verification / Alternative check:
Binary vector systems retain LB and RB around cargo genes; removing either border abolishes transfer, confirming the requirement for two borders flanking the insert.


Why Other Options Are Wrong:

One set: insufficient; T-DNA must be delimited at both ends.Three or four sets: not part of the canonical architecture.Sequence-independent: false; transfer is border-dependent.


Common Pitfalls:
Confusing vir gene locations (in trans) with cis borders; vir genes are not transferred, while the bordered segment is.


Final Answer:
Two sets of sequences necessary for gene transfer.

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