Difficulty: Medium
Correct Answer: Cleavage N-terminal signal sequence and a hydrophobic stop-transfer sequence
Explanation:
Introduction:Integral membrane proteins use topogenic signals to achieve correct orientation. Type I single-pass proteins have an N-terminal lumenal domain and a cytosolic C-terminus. Understanding how signal peptides and stop-transfer sequences coordinate insertion is essential for predicting topology from sequence.
Given Data / Assumptions:
Concept / Approach:Type I proteins begin with an N-terminal signal peptide that is cleaved in the ER lumen. Downstream, a hydrophobic stop-transfer sequence exits the lateral gate of the translocon to become the membrane-spanning helix, anchoring the protein with N-terminus in the lumen and C-terminus in the cytosol. This combination—cleaved signal peptide plus stop-transfer anchor—defines Type I topology.
Step-by-Step Solution:
Signal peptide emerges from the ribosome, binds SRP, and targets the complex to the ER membrane.Insertion through Sec61 begins; signal peptide is cleaved by signal peptidase in the lumen.A downstream hydrophobic segment acts as a stop-transfer sequence and partitions into the lipid bilayer.Translocation stops; the remainder of the protein is synthesized on the cytosolic side, producing Type I orientation.Verification / Alternative check:Protease protection assays and glycosylation mapping confirm N-lumenal/C-cytosolic orientation for Type I proteins; mutational loss of the stop-transfer helix disrupts membrane anchoring.
Why Other Options Are Wrong:
Common Pitfalls:Confusing Type I (cleaved signal + stop-transfer) with Type II/III (internal signal-anchor) or assuming all hydrophobic stretches are equivalent in topogenesis.
Final Answer:Cleavage N-terminal signal sequence and a hydrophobic stop-transfer sequence
Discussion & Comments