Ribosomal elongation — direction of peptide transfer During translation elongation on the ribosome, in what direction is the growing polypeptide chain transferred between tRNA binding sites?

Difficulty: Medium

Correct Answer: From the P site to the A site on the ribosome

Explanation:


Introduction:
Understanding the choreography of tRNAs on the ribosome is fundamental to molecular biology. Elongation involves precise positioning of the peptidyl-tRNA and the incoming aminoacyl-tRNA in the P and A sites, respectively, followed by peptide bond formation and translocation.



Given Data / Assumptions:

  • The ribosome contains A (aminoacyl), P (peptidyl), and E (exit) sites.
  • Peptidyl transferase activity resides in rRNA of the large subunit.
  • Aminoacyl-tRNA initially enters the A site, guided by elongation factors.


Concept / Approach:

Peptide bond formation transfers the growing polypeptide from the tRNA in the P site to the amino acid on the tRNA in the A site. After this chemical transfer, ribosomal translocation moves the new peptidyl-tRNA from A to P, and the deacylated tRNA shifts from P to E.


Step-by-Step Solution:

Place peptidyl-tRNA in the P site and the new aminoacyl-tRNA in the A site.Peptidyl transferase catalyzes peptide bond formation: the peptide is transferred P → A.Translocation (EF-G in bacteria) then shifts tRNAs so the peptidyl-tRNA moves A → P, preparing for the next cycle.The deacylated tRNA exits via the E site.


Verification / Alternative check:

Kinetic and structural studies show that the nucleophilic attack comes from the amino group of the A-site aminoacyl-tRNA on the carbonyl carbon of the P-site peptidyl-tRNA, confirming transfer of the chain from P to A during bond formation.


Why Other Options Are Wrong:

Option A reverses the chemical transfer step; A → P describes the positional change after translocation, not the bond-forming transfer. Options C and D involve movement to the E site, which is for deacylated tRNA, not peptide growth. Random transfer is incompatible with ribosome mechanics.


Common Pitfalls:

Confusing chemical transfer (P → A during peptide bond formation) with physical translocation (A → P after the bond forms). Keeping these steps distinct avoids errors.


Final Answer:

From the P site to the A site on the ribosome

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